Objectives-To determine the timing of viral clearance (first negative RT-PCR on nasopharyngeal swab) and the probability of viral clearance confirmation (two consecutive negative swabs) in COVID-19 patients and to identify related determinants. Design-Population-based prospective cohort study on archive data. Setting-Preventive services and hospital care in the Reggio Emilia Province, northern Italy. Participants-All 1162 subjects testing positive to RT-PCR on nasopharyngeal swabs and diagnosed with COVID-19 in the Reggio Emilia Province with at least 30 days of follow-up by April 22, 2020. Main outcome measures-Median times from diagnosis and from symptom onset to viral clearance with interquartile range (IQR) assessed using the Kaplan-Meier estimator, stratified by included characteristics. The probability of viral clearance confirmation, stratified by time from diagnosis, and putative determinants assessed using a multivariate logistic regression model. Results-Viral clearance was achieved by60.6% (704/1162) of patients, with a median time of 30 days from diagnosis (IQR 23-40) and 36 days from symptom onset (IQR 28-45). Of those negative and retested, 78.7% (436/554) had viral clearance confirmation, suggesting one in five false negative tests. The time from symptom onset to viral clearance slightly increased with age, from 35 (IQR 26-44) days under age 50 to 38 (IQR 28-44) in over age80, and with disease severity, from 33 (IQR 25-41) days in non-hospitalised subjects to 38 (IQR 30-47) days in hospitalisedpatients. The probability of confirmed viral clearance reached 86.8% after 34 days from symptom onset and increased with time, even when adjusting for age and sex (OR 1.16 95%CI 1.06-1.26 per day from diagnosis). Conclusions-Postponing follow-up testing of clinically recovered COVID-19 patients could increase the efficiency and performance of testing protocols. Understanding viral shedding duration also has implications for containment measures of paucisymptomatic subjects.

Temporal profile and determinants of viral shedding and of viral clearance confirmation on nasopharyngeal swabs from SARS-CoV-2-positive subjects: A population-based prospective cohort study in Reggio Emilia, Italy / Mancuso, P.; Venturelli, F.; Vicentini, M.; Perilli, C.; Larosa, E.; Bisaccia, E.; Bedeschi, E.; Zerbini, A.; Rossi, P. G.. - In: BMJ OPEN. - ISSN 2044-6055. - 10:8(2020), pp. e040380-e040380. [10.1136/bmjopen-2020-040380]

Temporal profile and determinants of viral shedding and of viral clearance confirmation on nasopharyngeal swabs from SARS-CoV-2-positive subjects: A population-based prospective cohort study in Reggio Emilia, Italy

Venturelli F.
;
Bisaccia E.;
2020

Abstract

Objectives-To determine the timing of viral clearance (first negative RT-PCR on nasopharyngeal swab) and the probability of viral clearance confirmation (two consecutive negative swabs) in COVID-19 patients and to identify related determinants. Design-Population-based prospective cohort study on archive data. Setting-Preventive services and hospital care in the Reggio Emilia Province, northern Italy. Participants-All 1162 subjects testing positive to RT-PCR on nasopharyngeal swabs and diagnosed with COVID-19 in the Reggio Emilia Province with at least 30 days of follow-up by April 22, 2020. Main outcome measures-Median times from diagnosis and from symptom onset to viral clearance with interquartile range (IQR) assessed using the Kaplan-Meier estimator, stratified by included characteristics. The probability of viral clearance confirmation, stratified by time from diagnosis, and putative determinants assessed using a multivariate logistic regression model. Results-Viral clearance was achieved by60.6% (704/1162) of patients, with a median time of 30 days from diagnosis (IQR 23-40) and 36 days from symptom onset (IQR 28-45). Of those negative and retested, 78.7% (436/554) had viral clearance confirmation, suggesting one in five false negative tests. The time from symptom onset to viral clearance slightly increased with age, from 35 (IQR 26-44) days under age 50 to 38 (IQR 28-44) in over age80, and with disease severity, from 33 (IQR 25-41) days in non-hospitalised subjects to 38 (IQR 30-47) days in hospitalisedpatients. The probability of confirmed viral clearance reached 86.8% after 34 days from symptom onset and increased with time, even when adjusting for age and sex (OR 1.16 95%CI 1.06-1.26 per day from diagnosis). Conclusions-Postponing follow-up testing of clinically recovered COVID-19 patients could increase the efficiency and performance of testing protocols. Understanding viral shedding duration also has implications for containment measures of paucisymptomatic subjects.
2020
10
8
e040380
e040380
Temporal profile and determinants of viral shedding and of viral clearance confirmation on nasopharyngeal swabs from SARS-CoV-2-positive subjects: A population-based prospective cohort study in Reggio Emilia, Italy / Mancuso, P.; Venturelli, F.; Vicentini, M.; Perilli, C.; Larosa, E.; Bisaccia, E.; Bedeschi, E.; Zerbini, A.; Rossi, P. G.. - In: BMJ OPEN. - ISSN 2044-6055. - 10:8(2020), pp. e040380-e040380. [10.1136/bmjopen-2020-040380]
Mancuso, P.; Venturelli, F.; Vicentini, M.; Perilli, C.; Larosa, E.; Bisaccia, E.; Bedeschi, E.; Zerbini, A.; Rossi, P. G.
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11380/1210693
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