Over the last years, analyses performed on a stochastic model of catalytic reaction networks have provided some indications about the reasons why wet-lab experiments hardly ever comply with the phase transition typically predicted by theoretical models with regard to the emergence of collectively self-replicating sets of molecule (also defined as autocatalytic sets, ACSs), a phenomenon that is often observed in nature and that is supposed to have played a major role in the emergence of the primitive forms of life. The model at issue has allowed to reveal that the emerging ACSs are characterized by a general dynamical fragility, which might explain the difficulty to observe them in wet-lab experiments. In this work, the main results of the various analyses are reviewed, with particular regard to the factors able to affect the generic properties of catalytic reactions networks, for what concerns not only the probability of ACSs to be observed, but also the overall activity of the system, in terms of production of new species, reactions and matter.

Recent developments in research on catalytic reaction networks / Chiara, Damiani; Alessandro, Filisetti; Alex, Graudenzi; Villani, Marco; Serra, Roberto. - In: ELECTRONIC PROCEEDINGS IN THEORETICAL COMPUTER SCIENCE. - ISSN 2075-2180. - ELETTRONICO. - 130:(2013), pp. 3-13. (Intervento presentato al convegno Wivace 2013 - Italian Workshop on Artificial Life and Evolutionary Computation tenutosi a Milan, Italy nel July 1-2, 2013) [10.4204/EPTCS.130.3].

Recent developments in research on catalytic reaction networks

VILLANI, Marco;SERRA, Roberto
2013

Abstract

Over the last years, analyses performed on a stochastic model of catalytic reaction networks have provided some indications about the reasons why wet-lab experiments hardly ever comply with the phase transition typically predicted by theoretical models with regard to the emergence of collectively self-replicating sets of molecule (also defined as autocatalytic sets, ACSs), a phenomenon that is often observed in nature and that is supposed to have played a major role in the emergence of the primitive forms of life. The model at issue has allowed to reveal that the emerging ACSs are characterized by a general dynamical fragility, which might explain the difficulty to observe them in wet-lab experiments. In this work, the main results of the various analyses are reviewed, with particular regard to the factors able to affect the generic properties of catalytic reactions networks, for what concerns not only the probability of ACSs to be observed, but also the overall activity of the system, in terms of production of new species, reactions and matter.
2013
Wivace 2013 - Italian Workshop on Artificial Life and Evolutionary Computation
Milan, Italy
July 1-2, 2013
130
3
13
Chiara, Damiani; Alessandro, Filisetti; Alex, Graudenzi; Villani, Marco; Serra, Roberto
Recent developments in research on catalytic reaction networks / Chiara, Damiani; Alessandro, Filisetti; Alex, Graudenzi; Villani, Marco; Serra, Roberto. - In: ELECTRONIC PROCEEDINGS IN THEORETICAL COMPUTER SCIENCE. - ISSN 2075-2180. - ELETTRONICO. - 130:(2013), pp. 3-13. (Intervento presentato al convegno Wivace 2013 - Italian Workshop on Artificial Life and Evolutionary Computation tenutosi a Milan, Italy nel July 1-2, 2013) [10.4204/EPTCS.130.3].
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